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<article xml:lang="en" article-type="research-article" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">
    <front>
        <journal-meta>
            <journal-id journal-id-type="publisher-id">PSJFS</journal-id>
            <journal-title-group>
                <journal-title>Potravinarstvo Slovak Journal of Food Sciences</journal-title>
                <abbrev-journal-title abbrev-type="pubmed">Potr. S. J. F. Sci.</abbrev-journal-title>
            </journal-title-group>
            <issn pub-type="ppub">1338-0230</issn>
            <issn pub-type="epub">1337-0960</issn>
            <publisher>
                <publisher-name>Association HACCP Consulting</publisher-name>
            </publisher>
        </journal-meta>
        <article-meta>
            <article-id pub-id-type="publisher-id">PSJFS-15-1-1093</article-id>
            <article-id pub-id-type="doi">10.5219/1693</article-id>
            <article-categories>
                <subj-group subj-group-type="heading">
                    <subject>ARTICLE</subject>
                </subj-group>
            </article-categories>
            <title-group>
                <article-title>ANTIBIOFILM AND ANTIOXIDANT ACTIVITY OF <italic>ROSMARINUS OFFICINALIS</italic> ESSENTIAL OIL</article-title>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author">
                    <name>
                        <surname>Galovičová</surname>
                        <given-names>Lucia</given-names>
                    </name>
                    <xref ref-type="aff" rid="aff1" />
                    <xref ref-type="corresp" rid="cor1">&#x002A;</xref>
                </contrib>
                <contrib contrib-type="author">
                    <name>
                        <surname>Borotová</surname>
                        <given-names>Petra</given-names>
                    </name>
                    <xref ref-type="aff" rid="aff2" />
                </contrib>
                <contrib contrib-type="author">
                    <name>
                        <surname>Valková</surname>
                        <given-names>Veronika</given-names>
                    </name>
                    <xref ref-type="aff" rid="aff3" />
                </contrib>
                <contrib contrib-type="author">
                    <name>
                        <surname>Kačániová</surname>
                        <given-names>Miroslava</given-names>
                    </name>
                    <xref ref-type="aff" rid="aff4" />
                </contrib>
                <aff id="aff1">
                    <institution>Lucia Galovičová, Department of Fruit Science, Viticulture and Enology, Faculty of Horticulture and Landscape Engineering, Tulipánová 7, 949 76, Nitra, Slovakia, Tel.: +421 907 260 116, E-mail: l.galovicova95@gmail.com ORCID: https://orcid.org/0000-0002-1203-4115</institution>
                </aff>
                <aff id="aff2">
                    <institution>Petra Borotová, Department of Animal Physiology, Faculty of Biotechnology and Food Sciences, Tr. A. Hlinku 2, 94976 Nitra, Slovakia, AgroBioTech Research Centre, Slovak University of Agriculture, Tr. A. Hlinku 2, 94976 Nitra, Slovakia, Tel.: +421 908 131 305, E-mail: petra.borotova@uniag.sk ORCID: https://orcid.org/0000-0003-0278-4323</institution>
                </aff>
                <aff id="aff3">
                    <institution>Veronika Valková, Department of Fruit Science, Viticulture and Enology, Faculty of Horticulture and Landscape Engineering, Tulipánová 7, 949 76, Nitra, Slovakia, AgroBioTech Research Centre, Slovak University of Agriculture, Tr. A. Hlinku 2, 94976 Nitra, Slovakia, Tel.: +421 911 633 386, E-mail: veronika.valkova@uniag.sk ORCID: https://orcid.org/0000-0001-7048-6323</institution>
                </aff>
                <aff id="aff4">
                    <institution>Miroslava Kačániová, Department of Fruit Science, Viticulture and Enology, Faculty of Horticulture and Landscape Engineering, Tulipánová 7, 949 76, Nitra, Slovakia; Department of Bioenergetics, Food Analysis and Microbiology, Institute of Food Technology and Nutrition, University of Rzeszow, Cwiklinskiej 1, 35-601 Rzeszow, Poland, Tel.: +421 905 499 166, E-mail: kacaniova.miroslava@gmail.com ORCID: https://orcid.org/0000-0002-4460-0222</institution>
                </aff>
            </contrib-group>
            <author-notes>
                <corresp id="cor1">
                    <label>&#x002A;</label>
                    <email xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="l.galovicova95@gmail.com">l.galovicova95@gmail.com</email>
                </corresp>
            </author-notes>
            <pub-date pub-type="epub">
                <day>28</day>
                <month>10</month>
                <year>2021</year>
            </pub-date>
            <pub-date pub-type="ppub">
                <month>10</month>
                <year>2021</year>
            </pub-date>
            <volume>15</volume>
            <issue>1</issue>
            <fpage>1093</fpage>
            <lpage>1103</lpage>
            <history>
                <date date-type="received">
                    <day>12</day>
                    <month>8</month>
                    <year>2021</year>
                </date>
                <date date-type="accepted">
                    <day>14</day>
                    <month>10</month>
                    <year>2021</year>
                </date>
            </history>
            <permissions>
                <copyright-statement>&#x00A9; Association HACCP Consulting. All rights reserved.</copyright-statement>
                <copyright-year>2021</copyright-year>
                <license license-type="open-access" xlink:href="http://creativecommons.org/licenses/by-nc/3.0/">
                    <license-p>This is an Open-Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (<uri xlink:href="http://creativecommons.org/licenses/by-nc/3.0/">http://creativecommons.org/licenses/by-nc/3.0</uri>) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <abstract>
                <p>The aim of the work was to explore the antioxidant potential and antibiofilm activity of the <italic>Rosmarinus officinalis</italic> essential oil. The DPPH method was used to determine the antioxidant activity. The agar microdilution method was used to determine the minimum biofilm inhibiting concentration (MBIC). The MALDI-TOF MS Biotyper was used to evaluate the antibiofilm activity on the wood and glass surface. Vapor phase antimicrobial analysis was used to determine the effect on the food model. The antioxidant activity was 28.76% ±2.68%. The MBIC for <italic>Stenotrophomonas maltophilia</italic> was 25 μL.mL<sup>-1</sup> and for <italic>Bacillus subtilis</italic> 12.5 μL.mL<sup>-1</sup>. Analysis of the mass spectra of S. maltophilia revealed an inhibitory effect from the 5<sup>th</sup>, which persisted until the end of the experiment. Analysis of the mass spectra of <italic>B. subtilis</italic> showed an inhibitory effect from the 7th of the experiment. The experiments showed an effect on both tested surfaces. The food model showed a more pronounced effect of the <italic>Rosmarinus officinalis</italic> essential oil against <italic>B. subtilis</italic>. We assume that the effect of the essential oil is to disrupt the polysaccharide structure of the biofilm and consequently reduce the resistance of the biofilm. We have established that MALDI-TOF MS Biotyper is a suitable tool for evaluating changes in biofilm structure and could find more significant application for the study of biofilms in food and clinical practice.</p>
                <p>
                    <bold>Keywords:</bold> biofilm; <italic>Stenotrophomonas maltophilia</italic>; <italic>Bacillus subtilis</italic>; essential oil; MALDI-TOF MS Biotyper</p>
            </abstract>
        </article-meta>
    </front>
    <body>
        <sec sec-type="intro">
            <title>INTRODUCTION</title>
            <p>In recent years, there has been a growing interest in research into essential oils and their applications in the food and human health. Essential oils are volatile aromatic substances that are obtained from glandular trichomes and other secretory structures of plants. Subsequently, they are distributed mainly on the surface of plant organs, especially flowers, leaves, stems, and roots. Essential oils and their ingredients are a safe alternative to chemical preservatives. They have biological activity that inhibits the growth of microorganisms (<xref ref-type="bibr" rid="b36">Zhang et al., 2020</xref>).</p>
            <p>Rosemary (<italic>Rosmarinus officinalis</italic>) is a perennial aromatic herb native to the Mediterranean Sea. It belongs to the family Lamiaceae. <italic>R. officinalis</italic> is an important source of volatile and non-volatile bioactive compounds (<xref ref-type="bibr" rid="b27">Rahbardar et al., 2017</xref>). The main components of <italic>R. officinalis</italic> essential oil are camphor, camphene, 1,8-cineole, &#x3B2;-thujene, &#x3B1;-thujene, chrysanthantone, and &#x3B2;-cubebene. These compounds show a variety of biological activities, including antimicrobial, antioxidant, anti-inflammatory, and anticarcinogenic properties (<xref ref-type="bibr" rid="b32">Touazi et al., 2018</xref>). Due to its therapeutic effects, it was used in the Middle Ages for the treatment of various diseases and it was also used as a preservative and flavouring agent (<xref ref-type="bibr" rid="b4">Elyemni et al., 2019</xref>).</p>
            <p>Biofilms are defined as complex bacterial communities found in an exopolysaccharide matrix on both biotic and abiotic surfaces. Biofilm formation is usually a cyclic multistage process. It is necessary to understand this process to develop effective strategies to combat pathogenic biofilms (<xref ref-type="bibr" rid="b15">Khatoon et al., 2018</xref>). The issue of biofilm formation concerns many food sectors such as the dairy industry, poultry and red meat processing, and fresh products (<xref ref-type="bibr" rid="b16">Kocot and Olszewska, 2017</xref>).</p>
            <p>
                <italic>Stenotrophomonas maltophilia</italic> plays an important role in the colonization of biotic and abiotic surfaces, which significantly increases its resistance to antibiotics. This opportunistic pathogen is the originator of many nosocomial infections (<xref ref-type="bibr" rid="b25">Pompilio et al., 2020</xref>). It is also often found in the food industry, for example in raw milk, fish products, vegetables, and also in drinking water reservoirs. The presence of <italic>S. maltophilia</italic> in food products causes deterioration and significantly endangers human health (<xref ref-type="bibr" rid="b36">Zhang et al., 2020</xref>).</p>
            <p>
                <italic>Bacillus subtilis</italic>, a non-pathogenic, gram-positive bacterium, is one of the most studied biofilm-forming microorganisms. Its importance in the food industry lies in the formation of a colony biofilm at the water-air interface (<xref ref-type="bibr" rid="b35">Yahav et al., 2018</xref>). Under industrial conditions, biofilm formation leads to costly regular cleaning, equipment corrosion, and the production of extracellular enzymes by biofilm bacteria. Importantly, endospore-producing biofilm genera such as Bacillus can become a significant source of persistent contamination (<xref ref-type="bibr" rid="b29">Ranmadugala et al., 2017</xref>).</p>
            <p>The work was aimed to evaluate the antioxidant and antibiofilm activity of the essential oil <italic>Rosmarinus officinalis</italic> against <italic>Stenotrophomonas maltophilia</italic> and <italic>Bacillus subtilis</italic>. To evaluate the molecular profiles of biofilms on glass and wood after the application of <italic>R. officinalis</italic> essential oil using MALDI-TOF MS Biotyper. To evaluate the effectiveness of essential oil against biofilms in a food model (carrot, potato, apple) using the vapor phase antimicrobial analysis.</p>
            <sec>
                <title>Scientific hypothesis</title>
                <p>After studying the available literature, we assume the presence of bioactive substances and the antioxidant potential of the essential oil <italic>Rosmarinus officinalis</italic>. Given the available publications, we anticipate an antibiofilm effect against <italic>S. maltophilia</italic> and <italic>B. subtilis</italic>. We believe that the antibiofilm effect could also be manifested in the gas phase in the food model.</p>
            </sec>
        </sec>
        <sec sec-type="materials|methods">
            <title>MATERIAL AND METHODOLOGY</title>
            <sec>
                <title>Samples</title>
                <p>
                    <italic>Rosmarinus officinalis</italic> essential oil was purchased from the Slovak company Hanus s.r.o (Nitra, Slovakia). It was obtained by steam distillation of a flowering flower. The manufacturer states as the main components of the essential oil 1,8-cineole 38 – 55%, camphor 5 – 15%, &#x3B1; + &#x3B2; pinene 13 – 23%, limonene 1 – 4%, borneol 1 – 5%. The sample was stored in the cold (4 &#xB0;C) and in the dark throughout the analyses.</p>
            </sec>
            <sec>
                <title>Chemicals</title>
                <p>2,2-diphenyl-1-picrylhydrazyl (DPPH, Sigma Aldrich, Germany), Mueller Hinton Broth (MHB, Oxoid, Basingstoke, UK), Muller Hinton agar (MHA, Oxoid, Basingstoke, UK).</p>
            </sec>
            <sec>
                <title>Animals and Biological Material:</title>
                <p>Bacterial strains forming the biofilm of <italic>Stenotrophomonas maltophilia</italic> and <italic>Bacillus subtilis</italic> were obtained from the dairy industry in the Czech Republic. They were identified by 16S rRNA sequencing and MALDI-TOF MS Biotyper.</p>
            </sec>
            <sec>
                <title>Instruments</title>
                <p>Glomax spectrophotometer (Promega Inc., Madison, USA), MALDI-TOF MS Biotyper (Bruker, Daltonics, Bremen, Germany).</p>
            </sec>
            <sec>
                <title>Laboratory Methods</title>
                <p>To determine the antioxidant activity of <italic>Rosmarinus officinalis</italic> essential oil, 2,2-diphenyl-1-picrylhydrazyl (DPPH, Sigma Aldrich, Germany) was used according to the method of <xref ref-type="bibr" rid="b30">S&#xE1;nchez-Moreno, Larrauri and Saura‐Calixto (1998)</xref>. It is a colorimetric method in which the deep purple colour of DPPH changes to yellow after scavenging free radicals. The colour change is detected by a spectrophotometer. For essential oil analysis, a stock solution of DPPH was prepared by weighing 0.0025 g of DPPH into 100 mL of ethanol (96%). 3.9 mL of stock solution was pipetted into the tube and 0.1 mL of <italic>R. officinalis</italic> essential oil was added. The prepared mixture in triplicate was incubated at laboratory temperature in the dark place for 10 minutes. The absorbance of the sample was measured with Glomax spectrophotometer (Promega Inc., Madison, USA) at 515 nm and the average absorbance of the sample was calculated. The percentage of antioxidant activity was calculated according to the formula:</p>
                <p>
                    <disp-formula id="M1">
                        <mml:math display='block' xmlns:mml='http://www.w3.org/1998/Math/MathML' id="Eq1">
                            <mml:semantics>
                                <mml:mrow>
                                    <mml:mtext>AA%&#x00A0;=&#x00A0;[(A0&#x00A0;-&#x00A0;AAT)&#x00A0;/&#x00A0;A0&#x00A0;&#x00D7;</mml:mtext>
                                    <mml:mo>&#x2009;</mml:mo>
                                    <mml:mtext>100]</mml:mtext>
                                </mml:mrow>
                            </mml:semantics>
                        </mml:math>
                    </disp-formula>
                </p>
                <p>Where:</p>
                <p>A0 – is the absorbance of the control reaction (DPPH radical); AAT – is the absorbance of tested sample.</p>
                <p>Minimal Biofilm Inhibitory Concentration (MBIC) was determined according to <xref ref-type="bibr" rid="b8">Hassan et al. (2011)</xref>. The bacterial suspensions were incubated in the Mueller Hinton Broth (MHB, Oxoid, Basingstoke, UK) under aerobic conditions for 24 h at 37 &#xB0;C. After incubation, an inoculum with optical density of 0.5 McFarland standard was prepared. 100 &#x3BC;L MHB and 50 &#x3BC;L inoculum were pipetted into a 96-well microtiter plate. Subsequently, 100 &#x3BC;L of essential oil was added to the first column of the microplate. Mixing with a pipette gave a two-fold dilution with concentrations from 400 &#x3BC;L.mL<sup>-1</sup> to 0.195 &#x3BC;L.mL<sup>-1</sup>. MHB with essential oil was used as a negative control and MHB with bacterial inoculum was used as maximal growth control. After culturing for 24 hours at 37 &#xB0;C in an aerostat, the supernatant was discarded, the wells were washed three times with 250 &#x3BC;L of saline and allowed to dry for 30 minutes at laboratory temperature. After drying, the wells were stained with 200 &#x3BC;L crystal violet (0.1% w/v) for 15 minutes. The plates were repeatedly washed with distilled water and allowed to dry. Subsequently, 200 &#x3BC;L of 33% acetic acid was added to resolubilize the samples. Samples were measured on Glomax spectrophotometer (Promega Inc., Madison, USA) at 570 nm. The concentration at which the absorbance was lower or equal to the negative control was determined as MBIC.</p>
            </sec>
            <sec>
                <title>Description of the Experiment</title>
                <sec>
                    <title>Sample preparation:</title>
                    <p>The analysis of the developmental stages of the biofilm and the evaluation of the molecular differences on the glass and the wood were performed in the same way as in <xref ref-type="bibr" rid="b11">Ka&#x10D;&#xE1;niov&#xE1; et al. (2020a)</xref> using MALDI-TOF MS Biotyper (Bruker, Daltonics, Bremen, Germany).</p>
                    <p>The antibiofilm activity of <italic>R. officinalis</italic> in a food model was analysed by a vapor phase antimicrobial assay. The antibiofilm effect was analysed on potato, carrot, and apple. Vegetables and fruit were cut into 5 mm slices and washed with distilled water. A layer of Muller Hinton agar (MHA, Oxoid, Basingstoke, UK) was poured into 60 mm Petri dishes and lids. After the agar solidification, one slice of the sample was placed on the plates. <italic>S. maltophilia</italic> and <italic>B. subtilis</italic> were applied to the samples by stabbing. The essential oil was diluted in ethyl acetate to final concentrations of 500, 250, and 125 &#x3BC;g.mL<sup>-1</sup>. A circle of sterile 55 mm diameter filter paper was placed in the lid. 100 &#x3BC;L of the appropriate concentration of essential oil was pipetted onto the surface of the filter paper. The filter paper was allowed to dry for 1 minute to evaporate the ethyl acetate and the dishes were sealed. Petri dishes were incubated for 7 days at 37 &#xB0;C. Inhibition of bacterial growth by the essential oil was expressed as a percentage of inhibition compared to the control, where the control represented 0% inhibition. Inhibition by more than 50% was considered effective.</p>
                    <p><bold>Number of samples analyzed:</bold> biofilm18, food model 24</p>
                    <p><bold>Number of repeated analyses:</bold> 3</p>
                    <p><bold>Number of experiment replication:</bold> 3</p>
                </sec>
            </sec>
            <sec>
                <title>Statistical analysis</title>
                <p>All analyses were performed in triplicate. Statistical variability of data was processed using Microsoft-Excel&#xAE; software.</p>
            </sec>
        </sec>
        <sec sec-type="results|discussion">
            <title>RESULTS AND DISCUSSION</title>
            <p>The antioxidant activity of <italic>Rosmarinus officinalis</italic> essential oil was 28.76% &#xB1;2.68%. <xref ref-type="bibr" rid="b34">Wang et al. (2008)</xref> in their work determined a free radical scavenging activity 62.45% &#xB1;3.42%. <xref ref-type="bibr" rid="b5">Gachkar et al. (2007)</xref> found out, that antioxidant activity is 69.30%. <xref ref-type="bibr" rid="b14">Kasparavi&#x10D;ien&#x117; et al. (2013)</xref> determined the antioxidant activity of <italic>R. officinalis</italic> at 75.96% &#xB1;1.12%. <xref ref-type="bibr" rid="b9">Hussain et al. (2010)</xref> found out free radical scavenging activity 33.60%. <xref ref-type="bibr" rid="b23">Okoh, Sadimenko and Afolayan (2011)</xref> detected, that antioxidant activity is 48.80%. <xref ref-type="bibr" rid="b31">Teneva et al. (2020)</xref> compared the antioxidant activity of essential oils from the leaves and flowers of <italic>R. officinalis</italic>. They recorded antioxidant activity in range 25 – 82%. This variability was due to the different chemical composition of the essential oils. <xref ref-type="bibr" rid="b20">Mohammed et al. (2020)</xref> set the percentage of free radical scavenging at 44.50%. <xref ref-type="bibr" rid="b22">Nie et al. (2020)</xref> determined free radical scavenging activity 39.50%. <xref ref-type="bibr" rid="b1">Amjadi et al. (2020)</xref> determined the antioxidant activity of rosemary essential oil at 24.00% &#xB1;3.10%. <xref ref-type="bibr" rid="b13">Kanth et al. (2018)</xref> examined the antioxidant activity at concentrations range 1250 – 25000 ppm and found free radical scavenging activity 8.16 – 51.8%. The differences between the individual findings may be due to different chemical composition of the essential oils and the different concentrations of the active substances. The authors agree that <italic>R. officinalis</italic> essential oil has increased antioxidant activity, and our findings confirm this.</p>
            <p>The minimal biofilm inhibiting concentrations determined by us were 25 &#x3BC;L.mL<sup>-1</sup> for <italic>Stenotrophomonas maltophilia</italic> and 12.5 &#x3BC;L.mL<sup>-1</sup> for <italic>Bacillus subtilis</italic>. <xref ref-type="bibr" rid="b33">Vieira et al. (2017)</xref> determined MBIC for <italic>B. subtilis</italic> 20 &#x3BC;L.mL<sup>-1</sup>. <xref ref-type="bibr" rid="b3">Elhariry et al. (2013)</xref> determined MBIC of rosemary 12 &#x3BC;L.mL<sup>-1</sup> for the genera <italic>Bacillus</italic> and <italic>Pseudomonas</italic>. <xref ref-type="bibr" rid="b10">Jardak et al. (2017)</xref> investigated the antibiofilm activity against <italic>S. epidermidis</italic> and recorded an effect at oncentration 25 &#x3BC;L.mL<sup>-1</sup>. <xref ref-type="bibr" rid="b13">Kanth et al. (2018)</xref> determined the MBIC for the biofilm of <italic>L. monocytogenes</italic> and <italic>S. aureus</italic> at 1.25 &#x3BC;L.mL<sup>-1</sup>. <xref ref-type="bibr" rid="b26">Quave et al. (2008)</xref> tested the antibiofilm effect of rosemary on <italic>S. aureus</italic> and determined MBIC 8 &#x3BC;L.mL<sup>-1</sup>. <xref ref-type="bibr" rid="b2">Ceylan et al. (2014)</xref> evaluated the antibiofilm activity of rosemary on <italic>S. aureus</italic> and determined MBIC 1.25 &#x3BC;L.mL<sup>-1</sup>. <xref ref-type="bibr" rid="b21">Nasr-Eldin, Abdelhamid and Baraka (2017)</xref> focused on the antibiofilm effect of essential oil on <italic>S. aureus</italic> and found MBIC 10 &#x3BC;L.mL<sup>-1</sup>. <xref ref-type="bibr" rid="b28">Rahnama et al. (2019)</xref> tested antibiofilm activity on <italic>B. cereus</italic> with MBIC 5 &#x3BC;L.mL<sup>-1</sup>. <xref ref-type="bibr" rid="b19">Miladi et al. (2016)</xref> determined MBIC 25 &#x3BC;L.mL<sup>-1</sup> for the genus Salmonella in their work. All authors agree that <italic>Rosmarinus officinalis</italic> essential oil has significant antibiofilm effect. Different minimum inhibitory concentrations are due to different origins of essential oils with different chemical compositions and because they were tested on different strains of bacteria.</p>
            <p>Analysis of the mass spectra of <italic>Stenotrophomonas maltophilia</italic> showed that on the third day of the experiment (Figure <xref ref-type="fig" rid="F1">1A</xref>), the similarity between the experimental spectra (wood and glass) and the control planktonic spectrum was maintained. On the fifth day of the experiment (Figure <xref ref-type="fig" rid="F1">1B</xref>), we recorded a gradual change in the experimental spectra compared to the control planktonicspectrum. The same trend was observed on the seventh day of the experiment (Figure <xref ref-type="fig" rid="F1">1C</xref>). On the ninth day of the experiment (Figure <xref ref-type="fig" rid="F1">1D</xref>) there was a decrease in the number of peaks in the experimental groups compared to the planktonic spectrum. The decrease was maintained on the twelfth day (Figure <xref ref-type="fig" rid="F1">1E</xref>) as well as the difference compared to the planktonic spectrum. On the last day (Figure <xref ref-type="fig" rid="F1">1F</xref>) of the experiment, there was an increase in the number of peaks in the experimental group compared to days 9 and 12, while maintaining the difference from the planktonic spectrum. The results show the inhibitory effect of the essential oil <italic>Rosmarinus officinalis</italic> on the structure of the biofilm.</p>
            <fig id="F1" position="float">
                <label>Figure 1</label>
                <caption>
                    <p>Representative MALDI-TOF mass spectra of <italic>S. maltophilia</italic>: (A) 3 days; (B) 5 days; (C) 7 days; (D) 9 days; (E) 12 days; and (F) 14 days.</p>
                </caption>
                <graphic xlink:href="PSJFS-15-1-1093_F1.jpg"/>
            </fig>
            <p>The <italic>S. maltophilia</italic> dendrogram (Figure <xref ref-type="fig" rid="F2">2</xref>) is divided into two main clusters and 5 subclusters. In the constructed dendrogram, it is possible to observe the grouping primarily to the time point of view of the analysed samples. The planktonic spectrum showed the most significant relationship with the experimental group on day 3 of the experiment in MSP distance. The control groups showed shorter MSP distances, and thus higher similarity of spectra from planktonic cells than the experimental groups in the following days. This finding confirms the inhibitory effect of <italic>R. officinalis</italic> essential oil.</p>
            <fig id="F2" position="float">
                <label>Figure 2</label>
                <caption>
                    <p>Dendrogram of <italic>S. maltophilia</italic> generated using the MSPs for all experimental group: SM – <italic>S. maltophilia</italic>; K – control; S – glass; D – wood; P – planktonic cell.</p>
                </caption>
                <graphic xlink:href="PSJFS-15-1-1093_F2.jpg"/>
            </fig>
            <p>Analysis of the mass spectra of <italic>Bacillus subtilis</italic> showed that on days 3 and 5 of the experiment (Figures <xref ref-type="fig" rid="F3">3A</xref> and <xref ref-type="fig" rid="F3">3B</xref>), the similarity between the experimental and planktonic spectra was maintained. On day 7 of the experiment, the difference between the experimental and control groups began to show (Figure <xref ref-type="fig" rid="F3">3C</xref>). On the ninth and twelfth days of the experiment (Figures <xref ref-type="fig" rid="F3">3D</xref> and <xref ref-type="fig" rid="F3">3E</xref>), the change in experimental spectra compared to the control planktonic spectrum continued. On the last day of the experiment (Figure <xref ref-type="fig" rid="F3">3F</xref>), the most significant difference between the experimental and control groups was noted. These findings confirm the inhibitory effect of the essential oil on the structure of the <italic>B. subtilis</italic> biofilm.</p>
            <fig id="F3" position="float">
                <label>Figure 3</label>
                <caption>
                    <p>Representative MALDI-TOF mass spectra of <italic>B. subtilis</italic>: (A) 3 days; (B) 5 days; (C) 7 days; (D) 9 days; (E) 12 days; and (F) 14 days.</p>
                </caption>
                <graphic xlink:href="PSJFS-15-1-1093_F3.jpg"/>
            </fig>
            <p>The <italic>B. subtilis</italic> dendrogram (Figure <xref ref-type="fig" rid="F4">4</xref>) consists of two main clusters, and it is possible to observe that analysed samples were grouped primarily according to time progression. The most significant similarity of the planktonic spectrum with the experimental group was recorded on days 3 and 5 of the experiment. All control groups were in the same cluster as the planktonic cells. Experimental groups from day 7 were divided into a separate cluster. This finding confirms the inhibitory effect of <italic>R. officinalis</italic> from day 7 of the experiment.</p>
            <fig id="F4" position="float">
                <label>Figure 4</label>
                <caption>
                    <p>Dendrogram of <italic>B. subtilis</italic> generated using the MSPs for all experimental group: BS – <italic>B. subtilis</italic>; K. – control; S – glass; D – wood; P – planktonic cell.</p>
                </caption>
                <graphic xlink:href="PSJFS-15-1-1093_F4.jpg"/>
            </fig>
            <p>
                <xref ref-type="bibr" rid="b24">Pereira et al. (2015)</xref> report that profiling with MALDI-TOF MS Biotyper is a very useful tool. Their results showed that the MALDI-TOF MS Biotyper approach is sufficiently sensitive to detect phenotypic changes in biofilm progression and can detect differences in biofilms cultured on different surfaces. <xref ref-type="bibr" rid="b18">Lo and Chang (2014)</xref> stated that the MALDI-TOF MS Biotyper is suitable for the investigation and identification of clinical isolates, including biofilm-forming ones. <xref ref-type="bibr" rid="b6">Gaudreau et al. (2018)</xref> found that the MALDI-TOF MS Biotyper is useful for biofilm studies. <xref ref-type="bibr" rid="b7">Hasan, Gopal and Wu (2011)</xref> confirm the suitability of the MALDI-TOF MS Biotyper method for biofilm analysis. <xref ref-type="bibr" rid="b11">Ka&#x10D;&#xE1;niov&#xE1; et al. (2020a)</xref> analysed the effect of <italic>Coriandrum sativum</italic> essential oil on the inhibition of <italic>S. maltophilia</italic> and <italic>B. subtilis</italic> biofilm with positive effect.</p>
            <p>In another work, <xref ref-type="bibr" rid="b12">Ka&#x10D;&#xE1;niov&#xE1; et al. (2020b)</xref> addressed the antibiofilm effect of <italic>Citrus aurantium</italic> essential oil by using MALDI-TOF MS Biotyper with positive result.</p>
            <p>The results of the analysis of antibiofilm activity in the food model show that the essential oil of <italic>R. officinalis</italic> showed an inhibitory effect. The essential oil inhibited the growth of <italic>S. maltophilia</italic> on carrots by more than 50% (Table <xref ref-type="table" rid="T1">1</xref>) at concentration 250 &#x3BC;g.mL<sup>-1</sup>. The effect was observed on potato at 500 &#x3BC;g.mL<sup>-1</sup> and apple at concentration 250 &#x3BC;g.mL<sup>-1</sup>. The essential oil inhibited the growth of <italic>B. subtilis</italic> by more than 50% (Table <xref ref-type="table" rid="T2">2</xref>) on carrots at concentration 500 &#x3BC;g.mL<sup>-1</sup>. The effect on potato and apple was already manifested at concentration 125 &#x3BC;g.mL<sup>-1</sup>. <xref ref-type="bibr" rid="b17">Laird and Phillips (2011)</xref> report that vapor phase essential oils are effective antimicrobial systems and have advantages over the use of liquid phase essential oils. <xref ref-type="bibr" rid="b12">Ka&#x10D;&#xE1;niov&#xE1; et al. (2020b)</xref> used this method in their work to determine the antifungal activity of the essential oil <italic>Citrus aurantium</italic>.</p>
            <table-wrap id="T1" position="float">
                <label>Table 1</label>
                <caption>
                    <p>In situ antimicrobial analyses of vegetables and fruit with S. maltophilia in vapor phase with essential oil <italic>R. officinalis</italic>.</p>
                </caption>
                <table frame="hsides" rules="none" width="100%">
                    <thead>
                        <tr>
                            <th>Concentration of EO</th>
                            <th rowspan="3">125 &#x03BC;L.L<sup>-1</sup></th>
                            <th rowspan="3">250 &#x03BC;L.L<sup>-1</sup></th>
                            <th rowspan="3">500 &#x03BC;L.L<sup>-1</sup></th>
                        </tr>
                        <tr>
                            <th>
                                <hr/>
                            </th>
                        </tr>
                        <tr>
                            <th>Food model</th>
                        </tr>
                        <tr>
                            <th colspan="4">
                                <hr/>
                            </th>
                        </tr>
                    </thead>
                    <tbody>
                        <tr align="center">
                            <td align="left">Carrot</td>
                            <td>50.78 &#x00B1;2.59</td>
                            <td>69.82 &#x00B1;3.21</td>
                            <td>87.80 &#x00B1;1.41</td>
                        </tr>
                        <tr align="center">
                            <td align="left">Potato</td>
                            <td>24.36 &#x00B1;2.11</td>
                            <td>47.44 &#x00B1;3.56</td>
                            <td>79.92 &#x00B1;1.27</td>
                        </tr>
                        <tr align="center">
                            <td align="left">Apple</td>
                            <td>42.56 &#x00B1;2.28</td>
                            <td>53.46 &#x00B1;1.41</td>
                            <td>85.45 &#x00B1;1.69</td>
                        </tr>
                    </tbody>
                </table>
            </table-wrap>
            <table-wrap id="T2" position="float">
                <label>Table 2</label>
                <caption>
                    <p>In situ antimicrobial analyses of vegetables and fruit with B. subtilis in vapor phase with essential oil <italic>R. officinalis</italic>.</p>
                </caption>
                <table frame="hsides" rules="none" width="100%">
                    <thead>
                        <tr>
                            <th>Concentration of EO</th>
                            <th rowspan="3">125 &#x03BC;L.L<sup>-1</sup></th>
                            <th rowspan="3">250 &#x03BC;L.L<sup>-1</sup></th>
                            <th rowspan="3">500 &#x03BC;L.L<sup>-1</sup></th>
                        </tr>
                        <tr>
                            <th>
                                <hr/>
                            </th>
                        </tr>
                        <tr>
                            <th>Food model</th>
                        </tr>
                        <tr>
                            <th colspan="4">
                                <hr/>
                            </th>
                        </tr>
                    </thead>
                    <tbody>
                        <tr align="center">
                            <td align="left">Carrot</td>
                            <td>20.39 &#x00B1;1.21</td>
                            <td>39.73 &#x00B1;2.67</td>
                            <td>67.42 &#x00B1;1.32</td>
                        </tr>
                        <tr align="center">
                            <td align="left">Potato</td>
                            <td>62.53 &#x00B1;2.52</td>
                            <td>74.46 &#x00B1;2.71</td>
                            <td>92.48 &#x00B1;1.83</td>
                        </tr>
                        <tr align="center">
                            <td align="left">Apple</td>
                            <td>64.56 &#x00B1;1.33</td>
                            <td>73.82 &#x00B1;1.19</td>
                            <td>89.35 &#x00B1;1.87</td>
                        </tr>
                    </tbody>
                </table>
            </table-wrap>
        </sec>
        <sec sec-type="conclusion">
            <title>CONCLUSION</title>
            <p>The work confirmed the antioxidant potential of <italic>Rosmarinus officinalis</italic> essential oil using the DPPH method. The findings suggest that the essential oil has significant effect on biofilm inhibition. This effect was confirmed by the change in biofilm structure recorded by the MALDI-TOF MS Biotyper and by vapor phase inhibition in a food model. It is believed that the effect of the essential oil is to disrupt the polysaccharide structure of the biofilm and consequently reduce the resistance of the biofilm. MALDI-TOF Biotyper is a suitable tool for evaluating changes in biofilm structure. It could find more significant application for the study of biofilms in the food and clinical practice.</p>
        </sec>
    </body>
    <back>
        <ack>
            <title>Acknowledgments:</title>
            <p>This work has been supported by the grants of the VEGA no. 1/0180/20.</p>
        </ack>
        <sec>
            <title>Funding:</title>
            <p>This work was supported by the grant APVV-20-0058 “The potential of the essential oils from aromatic plants for medical use and food preservation.”</p>
        </sec>
        <sec>
            <title>Conflict of Interest:</title>
            <p>The authors declare no conflict of interest.</p>
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