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<article xml:lang="en" article-type="research-article" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">
    <front>
        <journal-meta>
            <journal-id journal-id-type="publisher-id">PSJFS</journal-id>
            <journal-title-group>
                <journal-title>Potravinarstvo Slovak Journal of Food Sciences</journal-title>
                <abbrev-journal-title abbrev-type="pubmed">Potr. S. J. F. Sci.</abbrev-journal-title>
            </journal-title-group>
            <issn pub-type="ppub">1338-0230</issn>
            <issn pub-type="epub">1337-0960</issn>
            <publisher>
                <publisher-name>Association HACCP Consulting</publisher-name>
            </publisher>
        </journal-meta>
        <article-meta>
            <article-id pub-id-type="publisher-id">PSJFS-13-1-314</article-id>
            <article-id pub-id-type="doi">10.5219/1093</article-id>
            <article-categories>
                <subj-group subj-group-type="heading">
                    <subject>ARTICLE</subject>
                </subj-group>
            </article-categories>
            <title-group>
                <article-title>PROTEOMIC STUDY OF PIG&#x2019;S SPLEEN</article-title>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author">
                    <contrib-id contrib-id-type="orcid">http://orcid.org/0000-0002-4752-3939</contrib-id>
                    <name>
                        <surname>Vasilevskaya</surname>
                        <given-names>Ekaterina Romanovna</given-names>
                    </name>
                    <xref ref-type="corresp" rid="cor1">&#x002A;</xref>
                </contrib>
                <contrib contrib-type="author">
                    <contrib-id contrib-id-type="orcid">http://orcid.org/0000-0002-0211-8171</contrib-id>
                    <name>
                        <surname>Akhremko</surname>
                        <given-names>Anastasiya Gennadievna</given-names>
                    </name>
                    <xref ref-type="aff" rid="aff2" />
                </contrib>
                <aff id="aff2">
                    <institution>Anastasia Gennadievna Akhremko, V. M. Gorbatov Federal Research Center for Food Systems of RAS, Experimental-clinical research laboratory of bioactive substances of animal origin, Talalikhina st., 26, 109316, Moscow, Russia, Tel.: +79152379497, E-mail: a.ahremko@fncps.ru</institution>
                </aff>
            </contrib-group>
            <author-notes>
                <corresp id="cor1">
                    <label>&#x002A;</label>Corresponding author: Ekaterina Romanovna Vasilevskaya, V. M. Gorbatov Federal Research Center for Food Systems of RAS, Experimental-clinical research laboratory of bioactive substances of animal origin, Talalikhina st., 26, 109316, Moscow, Russia, Tel.: <phone>+79688223598</phone>, E-mail: <email xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="e.vasilevskaya@fncps.ru">e.vasilevskaya@fncps.ru</email></corresp>
            </author-notes>
            <pub-date pub-type="ppub">
                <month>1</month>
                <year>2019</year>
            </pub-date>
            <volume>13</volume>
            <issue>1</issue>
            <fpage>314</fpage>
            <lpage>317</lpage>
            <history>
                <date date-type="received">
                    <day>12</day>
                    <month>3</month>
                    <year>2019</year>
                </date>
                <date date-type="accepted">
                    <day>12</day>
                    <month>3</month>
                    <year>2019</year>
                </date>
            </history>
            <permissions>
                <copyright-statement>&#x00A9; Association HACCP Consulting. All rights reserved.</copyright-statement>
                <copyright-year>2019</copyright-year>
                <license license-type="open-access" xlink:href="http://creativecommons.org/licenses/by-nc/3.0/">
                    <license-p>This is an Open-Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (<uri xlink:href="http://creativecommons.org/licenses/by-nc/3.0/">http://creativecommons.org/licenses/by-nc/3.0</uri>) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <abstract>
                <p>This work is devoted to pig spleen proteome study. Spleens were taken from Duroc pigs (females, 145 – 160 days old) and typical two-dimensional electrophoregrams were obtained. On proteomic maps after visualization and image analysis there were detected 600 fractions, including organ-specific proteins – 3 62 fractions. Among the identified constitutive fractions, the highest expression was observed (Vol spots more than 3.0E + 07) four protein spots S1, S9, S12 and S21, which are supposedly Annexin A1 (MW 38.76 kDa), Ectonucleoside triphosphate diphosphohydrolase 1 (MW 57.75 kDa) Procathepsin H CD59 (MW 37.45 kDa) and glycoprotein (MW 13.79 kDa), respectively. Obtained electrophoregrams analysis using information resources made it possible to identify different active compounds in spleen with various functions, mainly immunoregulatory – glycoprotein CD59 (Mm 13.79 kDa) and ATP-dependent RNA helicase (Mm 107.58 kDa); the intensely expressed LIM-domain of the actin-binding protein (Mm 83.99 kDa). The results obtained are a prospect for immunomodulating biologic development based on animal raw materials for farm animals.</p>
            </abstract>
            <kwd-group>
                <kwd>spleen</kwd>
                <kwd>two-dimensional electrophoresis</kwd>
                <kwd>pork</kwd>
                <kwd>proteomic</kwd>
            </kwd-group>
        </article-meta>
    </front>
    <body>
        <sec sec-type="intro">
            <title>INTRODUCTION</title>
            <p>Farm animals&#x27; organs and tissues are an inexhaustible resource of compounds involved in various regulatory and compensatory oraganism reactions (<xref ref-type="bibr" rid="b6">Chernukha et al., 2016;</xref> <xref ref-type="bibr" rid="b9">Kotenkova, Lukinova and Fedulova, 2017</xref>). Modern researches are aimed to identifying, studying and isolating proteins that are potentially capable of exhibiting biological activity.</p>
            <p>Today, one of the most effective ways to study active compounds derived from animal raw materials is complex tissue-specific proteins analysis at molecular level, which is commonly called the &#x201C;proteomic approach&#x201D;. The main proteomics method, still relevant today, is twodimensional electrophoresis, used to study protein changes and identify functional species and tissue-specific compounds (<xref ref-type="bibr" rid="b7">Chernukha et al., 2017</xref>). Two-dimensional electrophoresis technology allows us to separate thousands of proteins with high resolution, and characterize the isolated protein fractions using mass spectrometric methods. Obvious advantage proteomic approach over others lies in its ability to detect alternative proteins forms that are the result of co-and/ or post-translational modifications.</p>
            <p>Currently, animal tissue researches are aimed at studying biological processes in order to identify product quality and safety markers (for example, species, autolysis, quality defects) (<xref ref-type="bibr" rid="b12">Mora, Gallego and Toldr&#xE1;, 2018</xref>). However, scientific projects devoted to productive animals individual organs proteomic analysis for active protein components isolation and biologics creation based on them have great potential.</p>
            <p>This work is devoted to protein composition comparative study of pigs spleen and resulting two-dimensional electrophoregrams analysis in order to identify potential constitutive proteins to create biological preparations of immunomodulatory action.</p>
            <sec>
                <title>Scientific hypothesis</title>
                <p>Productive animals&#x27; organs and tissues are bioactive protein compounds source. Spleen as an immune organ may contain physiologically active proteins with a pronounced immune orientation.</p>
            </sec>
        </sec>
        <sec sec-type="materials|methods">
            <title>MATERIAL AND METHODOLOGY</title>
            <p>Duroc pigs spleen was selected as study object. In order to level the geographic population characteristics, animals were selected from healthy females of 145 – 160 days old on three farms: Lipetsk region (C1); Voronezh region (C2); Tyumen region (C3).</p>
            <sec>
                <title>Two dimensional gel electrophoresis (2-DE)</title>
                <p>The samples described above were subjected to 2-DE. Proteins were separated by IEF in the first dimension and SDS-PAGE in the second dimension essentially as described by Hirano (<xref ref-type="bibr" rid="b3">Hirano, 1982</xref>) with slight modifications (<xref ref-type="bibr" rid="b8">Kimura et al., 2003</xref>). IEF in the first dimension was performed at 3650 V.h<sup>-1</sup>. The anodic and cathodic electrode solutions used for IEF were 0.02 M H3PO4 and 0.02 &#x41C; NaOH, respectively, in 2.4 mm &#x00D7; 160 mm tube gels. After IEF, the extruded tube gels were incubated for 10 min, in 2.5 mL of equilibration buffer I (6 M urea, 20% w/v glycerol, 2% w/v SDS and 1% w/v DTT in 50 mM Tris-HCl buffer, pH 8.8) followed by equilibration buffer II (6 M urea, 30% w/v glycerol, 2% w/v SDS and 4% w/v iodoacetamide in 375 mM Tris/HCl buffer, pH 8.8). For SDS-PAGE, the equilibrated tube gels were transferred to a 12.5% polyacrylamide gel (170 mm &#x00D7; 180 mm &#x00D7; 1.5 mm). Electrophoresis was carried out with a gel running buffer containing 25 mM Tris-HCl, 192 mM glycine, and 0.1% w/v SDS at 30 mA per gel until the bromophenol blue front had reached the bottom ofthe gel.</p>
            </sec>
            <sec>
                <title>Protein visualization and image analysis</title>
                <p>Protein spots were visualized by staining with Coomassie Brilliant Blue G-250. For computerized densitometry, two-dimensional electrophoregrams were used, which were in a wet state. Their full digital images and/or images of individual fragments were obtained using a Bio-5000 plus scanner (Serva, Germany). Scanned images were analyzed with ImageMaster&#x2122; 2D Platinum software powered by Melanie 8.0 (GE Healthcare and Genebio, Switzerland). Spots were detected and quantified automatically. The relative optical density (OD) and relative volume were computed to correct for differences in gel staining. These measures take into account variations due to protein loading and staining, by considering the total OD or volume over all the spots in the gel. The digitized 2DE images of cortex were then compared by the matching method.</p>
                <p>Protein spots interpretation on spleen two-dimensional electrophoregrams was carried out in accordance with the <xref ref-type="bibr" rid="b14">Swiss-Prot database (2002)</xref>.</p>
            </sec>
            <sec>
                <title>Statisic analysis</title>
                <p>The experimental data between three organs were analyzed using student&#x27;s t-test, and data among several groups were analyzed by one-way ANOVA by ImageMaster&#x2122; 2D Platinum software powered by Melanie 8.0 (GE Healthcare and Genebio, Switzerland). A <italic>p</italic> value &#x003C;0.05 was considered significantly different. All results are presented as mean &#xB1;SD from at least three independent experiments.</p>
            </sec>
        </sec>
        <sec sec-type="results|discussion">
            <title>RESULTS AND DISCUSSION</title>
            <p>As a result of spleens 2-DE gels quantitative proteomic study images from pigs at three different farms (Figure <xref ref-type="fig" rid="F1">1</xref>) using ImageMaster &#x2122; 2D Platinum software, it was found that, on average, there are about 597 spots on each gel. At the same time, the most pronounced protein expression was detected in samples C2 – 624 fractions, the least pronounced protein expression was observed in samples C3 – 570 fractions. Two-dimensional electrophoregrams comparative analysis in all samples revealed 362 major (constitutively present) fractions.</p>
            <fig id="F1" position="float">
                <label>Figure 1</label>
                <caption>
                    <p>2D PAGE of pig&#x27;s spleen.</p>
                    <p>Note: С1 – AgroEko, С2 – SGC, С3 – Tumen. Spots showing differential expression were marked excised.</p>
                </caption>
                <graphic xlink:href="PSJFS-13-1-314_F1.jpg"/>
            </fig>
            <p>Among identified constitutive fractions (Figure <xref ref-type="fig" rid="F2">2</xref>), there were noted high expression protein spots S1, S9, S12, and S21, presumably Annexin A1 (MW 38.76 kDa), Ectonucleoside triphosphate diphosphohydrolase 1 (NTPDase 1, MW 57.75 kDa), Pro-cathepsin H CD59 (MW 37.45 kDa) and glycoprotein (MW 13.79 kDa), respectively. The biology of protein Annexin A1 functions, as revealed by studies <xref ref-type="bibr" rid="b1">D&#x27;acquisto, Perretti and Flower (2008)</xref> using transgenic animals, peptide mimetics and neutralizing antibodies, speaks to its role as a key modulator of both innate and adaptive immune systems. <xref ref-type="bibr" rid="b10">Lemmens et al. (2000)</xref> found that NTPDase 1 possesses both immunological identity and functional characteristics of vascular ATPDase. It is also known that Prokatepsin H regulates the signaling pathway of immune response (<xref ref-type="bibr" rid="b2">Gladue et al., 2014</xref>), and Glycoprotein is a strong inhibitor of membrane attack complex and nonspecific immune response (<xref ref-type="bibr" rid="b11">Maher et al., 1998</xref>).</p>
            <fig id="F2" position="float">
                <label>Figure 2</label>
                <caption>
                    <p>Relative vol change in differentially expressed proteins in spleens (blue – C1, red – C2, green – C3).</p>
                    <p>Note: Spot intensities were normalized by total valid spot intensities and mean of values from duplicate analytical gels from three replicates. Data represented are means &#xB1;SD of three independent experiments.</p>
                </caption>
                <graphic xlink:href="PSJFS-13-1-314_F2.jpg"/>
            </fig>
            <p>In accordance with the information databases resources, the following functional compounds were found in spleen samples: the leptin receptor (Mm 132.52 kDa), which acts as factor regulating appetite, causing decrease in food intake and an increase in energy consumption, also regulates bone mass and secretion of hypothalamic-adrenal pituitary hormones (<xref ref-type="bibr" rid="b13">Ruiz-Cort&#xE9;s et al., 2000</xref>); in small quantities, the transmembrane glycoprotein 3-hydroxy-3- methylglutaryl-coenzyme A reductase (Mm 97.15 kDa), which limits the rate of cholesterol biosynthesis and participates in the biosynthesis of isoprenoids necessary for the normal functioning of cells (<xref ref-type="bibr" rid="b5">Chen et al., 2012</xref>).</p>
            <p>Fractions, involved to innate immune response mechanisms, were identified, such as glycoprotein CD59 (Mm 13.79 kDa) and ATP-dependent RNA helicase (Mm 107.58 kDa) (<xref ref-type="bibr" rid="b20">Zhang et al., 2000</xref>); the intensely expressed LIM-domain of the actin-binding protein (Mm 83.99 kDa), which is involved in the regulation of the cytoskeleton of actin, which increases the number and size of actin stress fibers, as well as inhibits the depolymerization of actin filaments (<xref ref-type="bibr" rid="b15">Wang et al., 2007</xref>).</p>
            <p>Also on two-dimensional electrophoregrams, a proteins group was identified that is characteristic of all analyzed spleens and plays an important role in innate immune response and inflammatory processes regulation: interferon stimulator protein (Mm 41.8 kDa), chemokine-like receptor 1 (Mm 41.38 kDa), platelet activating receptor (Mm 39.43 kDa); TYRO tyrosine kinase binding protein (Mm 11.61 kDa), activating macrophages and neutrophils, directly involved in immune response (<xref ref-type="bibr" rid="b16">Xie et al., 2010;</xref> <xref ref-type="bibr" rid="b4">Huang et al., 2010;</xref>. <xref ref-type="bibr" rid="b17">Yang, Diehl and Roudebush, 2003;</xref> <xref ref-type="bibr" rid="b18">Yang et al., 2003;</xref> <xref ref-type="bibr" rid="b19">Yim et al., 2000</xref>).</p>
        </sec>
        <sec sec-type="conclusion">
            <title>CONCLUSION</title>
            <p>Studies of pigs spleens two-dimensional maps made it possible to establish proteins wide range presence — up to 600 fractions, of which 362 fractions are structural.</p>
            <p>Detected fractions on the obtained maps are predominantly physiologically active, wherein their activity consists mainly in participation in various immunoregulatory reactions. Thus, in spleen samples there are found both compounds with immunoregulatory function (glycoprotein CD59, ATP-dependent RNA-helicase, LIM-domain of actin-binding protein), and factors involved in metabolism regulation (leptin receptor, transmembrane glycoprotein 3-hydroxy- 3-methylglutaryl-coenzyme A-reductase). It can be explaned by spleen biological role in organism and, as a result, a special structure – the division into red and white pulp and marginal zone, which produce compounds of various specificities.</p>
            <p>This work is the first step to development of immunomodulating biologic based on animal raw materials for farm animals.</p>
        </sec>
    </body>
    <back>
        <ack>
            <title>Acknowledgments:</title>
            <p>This work was supported by grant Russian Science Foundation No 15-16-00008.</p>
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